Index A | B | C | D | F | H | K | L | M | O | P | R | S | T | X A adata (popv.hub.HubModel attribute) agreement_score_bar_plot() (in module popv.visualization) AlgorithmsNT (class in popv.annotation) ALL_ALGORITHMS (popv.annotation.AlgorithmsNT attribute) anndata_version (popv.hub.HubMetadata attribute) (popv.hub.HubModelCardHelper attribute) annotate_data() (in module popv.annotation) (popv.hub.HubModel method) B BaseAlgorithm (class in popv.algorithms) C celltype_ratio_bar_plot() (in module popv.visualization) CELLTYPIST (class in popv.algorithms) cellxgene_url (popv.hub.HubMetadata attribute) (popv.hub.HubModelCardHelper attribute) compute_integration() (popv.algorithms.BaseAlgorithm method) (popv.algorithms.CELLTYPIST method) (popv.algorithms.KNN_BBKNN method) (popv.algorithms.KNN_HARMONY method) (popv.algorithms.KNN_SCANORAMA method) (popv.algorithms.KNN_SCVI method) (popv.algorithms.ONCLASS method) (popv.algorithms.Random_Forest method) (popv.algorithms.SCANVI_POPV method) (popv.algorithms.Support_Vector method) (popv.algorithms.XGboost method) compute_umap() (popv.algorithms.BaseAlgorithm method) (popv.algorithms.CELLTYPIST method) (popv.algorithms.KNN_BBKNN method) (popv.algorithms.KNN_HARMONY method) (popv.algorithms.KNN_SCANORAMA method) (popv.algorithms.KNN_SCVI method) (popv.algorithms.ONCLASS method) (popv.algorithms.Random_Forest method) (popv.algorithms.SCANVI_POPV method) (popv.algorithms.Support_Vector method) (popv.algorithms.XGboost method) create_criticism_report() (in module popv.hub) CURRENT_ALGORITHMS (popv.annotation.AlgorithmsNT attribute) D description (popv.hub.HubModelCardHelper attribute) F FAST_ALGORITHMS (popv.annotation.AlgorithmsNT attribute) from_anndata() (popv.hub.HubMetadata class method) from_dir() (popv.hub.HubModelCardHelper class method) H HubMetadata (class in popv.hub) HubModel (class in popv.hub) HubModelCardHelper (class in popv.hub) K KNN_BBKNN (class in popv.algorithms) KNN_HARMONY (class in popv.algorithms) KNN_SCANORAMA (class in popv.algorithms) KNN_SCVI (class in popv.algorithms) L license_info (popv.hub.HubModelCardHelper attribute) local_dir (popv.hub.HubModel attribute) M make_agreement_plots() (in module popv.visualization) map_genes() (popv.hub.HubModel method) metadata (popv.hub.HubModel attribute) method_kwargs (popv.hub.HubMetadata attribute) methods (popv.hub.HubMetadata attribute) metrics_report (popv.hub.HubModelCardHelper attribute) minified_adata (popv.hub.HubModel attribute) model_card (popv.hub.HubModel attribute) (popv.hub.HubModelCardHelper attribute) O ONCLASS (class in popv.algorithms) ontology_dir (popv.hub.HubModel attribute) organism (popv.hub.HubMetadata attribute) (popv.hub.HubModelCardHelper attribute) OUTDATED_ALGORITHMS (popv.annotation.AlgorithmsNT attribute) P popv_version (popv.hub.HubMetadata attribute) predict() (popv.algorithms.BaseAlgorithm method) (popv.algorithms.CELLTYPIST method) (popv.algorithms.KNN_BBKNN method) (popv.algorithms.KNN_HARMONY method) (popv.algorithms.KNN_SCANORAMA method) (popv.algorithms.KNN_SCVI method) (popv.algorithms.ONCLASS method) (popv.algorithms.Random_Forest method) (popv.algorithms.SCANVI_POPV method) (popv.algorithms.Support_Vector method) (popv.algorithms.XGboost method) prediction_keys (popv.hub.HubMetadata attribute) prediction_score_bar_plot() (in module popv.visualization) Process_Query (class in popv.preprocessing) pull_from_huggingface_hub() (popv.hub.HubModel class method) push_to_huggingface_hub() (popv.hub.HubModel method) R Random_Forest (class in popv.algorithms) references (popv.hub.HubModelCardHelper attribute) repo_name (popv.hub.HubModel attribute) S save() (popv.hub.HubMetadata method) (popv.hub.HubModel method) SCANVI_POPV (class in popv.algorithms) scikit_learn_version (popv.hub.HubMetadata attribute) (popv.hub.HubModelCardHelper attribute) setup_dict (popv.hub.HubMetadata attribute) Support_Vector (class in popv.algorithms) T tissues (popv.hub.HubModelCardHelper attribute) training_code_url (popv.hub.HubModelCardHelper attribute) X XGboost (class in popv.algorithms)
